Hello I was able to resolve these issue. I think something got messed up when I try to use setOptions to change the Series, valueAxis, or categoryAxis properties. The MVC wrappers create these properties as an Array and not an Object so you have to set all the properties again with setOptions. For example if your valueAxis configurations look like
"valueAxis": [{ "labels": { "format": "{0}%" }, "line": { "visible": false }, "min": 0, "max": 100, "majorUnit": 10 }]//This would NOT workvar options = { "valueAxis": [{ "labels": { "format": "{0} Calls" } }]}//Need to apply all valueAxis options again//with changesvar options = { "valueAxis": [{ "labels": { "format": "{0} Calls" }, "line": { "visible": false }, "min": 0, "max": 100, "majorUnit": 10 }]}